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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
Fecha : |
23/11/2021 |
Actualizado : |
23/11/2021 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Autor : |
OBERTI, H.; SPANGENBERG, G.; COGAN, C.; REYNO, R.; FEIJOO, M.; MURCHIO, S.; DALLA RIZZA, M. |
Afiliación : |
HÉCTOR OBERTI RVAROLA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; GERMAN SPANGENBERG, Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, Australia; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, Australia.; C. COGAN, Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, Australia; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, Australia.; RAFAEL ALEJANDRO REYNO PODESTA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; M. FEIJOO, Centro Universitario Regional del Este (CURE), Polo de Desarrollo Universitario: Patogenicidad, toxicidad y genética en los ecosistemas pastoriles de la región Este de Uruguay, Treinta y Tres, Uruguay.; MARIA SARA MURCHIO VIGNOLO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MARCO DALLA RIZZA VILARO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
Título : |
Genome-wide analysis of Claviceps paspali: insights into the secretome of the main species causing ergot disease in Paspalum spp. |
Complemento del título : |
Research article. |
Fecha de publicación : |
2021 |
Fuente / Imprenta : |
BMC Genomics, December 2021, Volume 22, Issue 1, Article number 766. Gold Open Access, Green Open Access. doi: https://doi.org/10.1186/s12864-021-08077-0 |
ISSN : |
1471-2164 |
DOI : |
10.1186/s12864-021-08077-0 |
Idioma : |
Inglés |
Notas : |
Article history: Received 24 September 2020; Accepted 11 October 2021; Published 26 October 2021.
Funding: This project was supported by the National Institute of Agricultural Research of Uruguay (INIA) project BT-19, and by project ATN/KF-13883-UR from the Inter-American Development Bank. HO Scholarship was founded by through the INIA Postgraduate Scholarship Program. The funding bodies played no role in the design of the study and collection, analysis, and interpretation of data and in writing the manuscript.
Acknowledgments: We thank Eduardo Abreo for C. paspali ILB388 isolate and for reading the manuscript, and Fernando Lattanzi for reading the manuscript.
Corresponding author: Dalla-Rizza, M.; Instituto Nacional de Investigación Agropecuaria (INIA). Unidad de Biotecnología. Estación Experimental INIA Las Brujas, Ruta 48 km, Canelones, Uruguay; email:mdallarizza@inia.org.uy |
Contenido : |
ABSTRACT - Background: The phytopatogen Claviceps paspali is the causal agent of Ergot disease in Paspalum spp., which includes highly productive forage grasses such as P. dilatatum. This disease impacts dairy and beef production by affecting seed quality and producing mycotoxins that can affect performance in feeding animals. The molecular basis of pathogenicity of C. paspali remains unknown, which makes it more difficult to find solutions for this problem. Secreted proteins are related to fungi virulence and can manipulate plant immunity acting on different subcellular localizations. Therefore, identifying and characterizing secreted proteins in phytopathogenic fungi will provide a better understanding of how they overcome host defense and cause disease. The aim of this work is to analyze the whole genome sequences of three C. paspali isolates to obtain a comparative genome characterization based on possible secreted proteins and pathogenicity factors present in their genome. In planta RNA-seq analysis at an early stage of the interaction of C. paspali with P. dilatatum stigmas was also conducted in order to determine possible secreted proteins expressed in the infection process.
© Copyright 2021 Elsevier B.V., All rights reserved. |
Palabras claves : |
Biotroph; Comparative genomics; Effectors; In silico prediction; Pathogenicity factors. |
Asunto categoría : |
F01 Cultivo |
URL : |
https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-021-08077-0.pdf
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Marc : |
LEADER 03099naa a2200289 a 4500 001 1062542 005 2021-11-23 008 2021 bl uuuu u00u1 u #d 022 $a1471-2164 024 7 $a10.1186/s12864-021-08077-0$2DOI 100 1 $aOBERTI, H. 245 $aGenome-wide analysis of Claviceps paspali$binsights into the secretome of the main species causing ergot disease in Paspalum spp.$h[electronic resource] 260 $c2021 500 $aArticle history: Received 24 September 2020; Accepted 11 October 2021; Published 26 October 2021. Funding: This project was supported by the National Institute of Agricultural Research of Uruguay (INIA) project BT-19, and by project ATN/KF-13883-UR from the Inter-American Development Bank. HO Scholarship was founded by through the INIA Postgraduate Scholarship Program. The funding bodies played no role in the design of the study and collection, analysis, and interpretation of data and in writing the manuscript. Acknowledgments: We thank Eduardo Abreo for C. paspali ILB388 isolate and for reading the manuscript, and Fernando Lattanzi for reading the manuscript. Corresponding author: Dalla-Rizza, M.; Instituto Nacional de Investigación Agropecuaria (INIA). Unidad de Biotecnología. Estación Experimental INIA Las Brujas, Ruta 48 km, Canelones, Uruguay; email:mdallarizza@inia.org.uy 520 $aABSTRACT - Background: The phytopatogen Claviceps paspali is the causal agent of Ergot disease in Paspalum spp., which includes highly productive forage grasses such as P. dilatatum. This disease impacts dairy and beef production by affecting seed quality and producing mycotoxins that can affect performance in feeding animals. The molecular basis of pathogenicity of C. paspali remains unknown, which makes it more difficult to find solutions for this problem. Secreted proteins are related to fungi virulence and can manipulate plant immunity acting on different subcellular localizations. Therefore, identifying and characterizing secreted proteins in phytopathogenic fungi will provide a better understanding of how they overcome host defense and cause disease. The aim of this work is to analyze the whole genome sequences of three C. paspali isolates to obtain a comparative genome characterization based on possible secreted proteins and pathogenicity factors present in their genome. In planta RNA-seq analysis at an early stage of the interaction of C. paspali with P. dilatatum stigmas was also conducted in order to determine possible secreted proteins expressed in the infection process. © Copyright 2021 Elsevier B.V., All rights reserved. 653 $aBiotroph 653 $aComparative genomics 653 $aEffectors 653 $aIn silico prediction 653 $aPathogenicity factors 700 1 $aSPANGENBERG, G. 700 1 $aCOGAN, C. 700 1 $aREYNO, R. 700 1 $aFEIJOO, M. 700 1 $aMURCHIO, S. 700 1 $aDALLA RIZZA, M. 773 $tBMC Genomics, December 2021, Volume 22, Issue 1, Article number 766. Gold Open Access, Green Open Access. doi: https://doi.org/10.1186/s12864-021-08077-0
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INIA Las Brujas (LB) |
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Registros recuperados : 14 | |
2. | | OBERTI, H.; DALLA RIZZA, M.; REYNO, R.; MURCHIO, S.; ALTIER, N.; ABREO, E. Diversity of Claviceps paspali reveals unknown lineages and unique alkaloid genotypes. Mycologia, 3 March 2020, Volume 112, Issue 2, Pages 230-243. Doi: https://doi.org/10.1080/00275514.2019.1694827 Article history: Received 25 Apr 2019 // Accepted 15 Nov 2019 // Published online: 07 Jan 2020. CONTACT: E. Abreo, eabreo@inia.org.uy. FUNDING: This work was supported by the National Institute of Agricultural Research (INIA) of Uruguay...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Tacuarembó. |
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3. | | DO CANTO, J.; REYNO, R.; OBERTI, H.; DALLA RIZZA, M.; REAL, D. Ergot and sterility in Bahiagrass: genotypic and environmental effects on seed yield potential. Agronomy, 2023, volume, 13, issue 3, Article 658. OPEN ACCESS. doi: https://doi.org/10.3390/agronomy13030658 Article history: Received 24 November 2022; Revised 19 February 2023; Accepted 21 February 2023; Published 24 February 2023. -- Correspondence author: Daniel Real, email: daniel.real@dpird.wa.gov.au -- This article belongs to the Section...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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4. | | OBERTI, H.; SPANGENBERG, G.; COGAN, C.; REYNO, R.; FEIJOO, M.; MURCHIO, S.; DALLA RIZZA, M. Genome-wide analysis of Claviceps paspali: insights into the secretome of the main species causing ergot disease in Paspalum spp. Research article. BMC Genomics, December 2021, Volume 22, Issue 1, Article number 766. Gold Open Access, Green Open Access. doi: https://doi.org/10.1186/s12864-021-08077-0 Article history: Received 24 September 2020; Accepted 11 October 2021; Published 26 October 2021.
Funding: This project was supported by the National Institute of Agricultural Research of Uruguay (INIA) project BT-19, and by project...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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6. | | CASTRO, L.; MURCHIO, S.; REYNO, R.; OBERTI, H.; DALLA RIZZA, M. Identificación y análisis de diversidad en colecta de aislados de Claviceps paspali de Uruguay. In: Sociedad Uruguaya de Fitopatología Jornada Uruguaya de Fitopatología, 6., Jornada Uruguaya de Protección Vegetal, 4., 21-22 octubre, 2021, Montevideo, Uruguay. Libro de resúmenes. Montevideo (UY): Sociedad Uruguay de Fitopatología (SUFIT), 2021. p. 30. Financiamiento: Proyecto BT-19 INIA.Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Treinta y Tres. |
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7. | | OBERTI, H.; ABREO, E.; REYNO, R.; FEIJOO, M.; MURCHIO, S.; DALLA RIZZA, M. New draft genome sequence of the ergot disease fungus claviceps paspali. Microbiology Resource Announcements, 16 July 2020, Volume 9, Issue 29, Article number e00498-20. OPEN ACCESS. Doi: https://doi.org/10.1128/MRA.00498-20 Article history: Received 28 May 2020; Accepted 20 June 2020; Published 16 July 2020.
Editor: Antonis Rokas - Vanderbilt University.
Corresponding author: Dalla-Rizza, M.; Instituto Nacional de Investigación Agropecuaria (INIA), Unidad de...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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8. | | OBERTI, H.; REYNO, R.; MURCHIO, S.; GOÑI, C.; DALLA RIZZA, M. Primer borrador del genoma de Paspalum malacophyllum, especie de relevancia como fuente de inmunidad al ergot en el pasto P. dilatatum. [resumen]. In: REDBIO México 2022, XI Congreso, "Biotecnología productiva y sostenible". Libro de resúmenes. 12-14 octubre 2022, Yucatán, México. p.20 Este proyecto fue financiado por INIA proyecto BT-19.Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Las Brujas. |
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11. | | OBERTI, H.; SESSA, L.; SÁNCHEZ-VALLET, A; NAVARRETE, F.; SEIDL, M.; PESSIO, M.; CIBILS-STEWART, X.; ABREO, E. Podemos mejorar una cepa de Beauveria bassiana biocontroladora de la chinche de la soja Piezodorus guildinii combinando métodos de biología molecular y datos de
secuenciación masiva?. O12. Módulo 3: Nuevas estrategias para potenciar el control biológico. In: Abreo, E.; Beyhaut, E.; Rivas, F. (Eds.). Simposio Microorganismos para la Agricultura, 2. [Resúmenes y Posters]. Canelones (UY): INIA, 2022. p.23. (Serie Actividades de Difusión; 801). Financiamiento: INIA SA_47, ANII_FMV_1_2021_1_169591, RYC2018-025530-I MCIN/AEI/10.13039/501100011033, EI FS.Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Las Brujas. |
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12. | | DALLA RIZZA, M.; OBERTI, H.; MURCHIO, S.; DO CANTO, J.; ABREO, E.; ROSSI, C.; AYALA, W.; REYNO, R. Surgen nuevos caminos para aportar soluciones a problemas en el "pasto miel". Biotecnología. Revista INIA Uruguay, 2020, no.63, p.68-72. (Revista INIA; 63).Tipo: Artículos en Revistas Agropecuarias |
Biblioteca(s): INIA Las Brujas. |
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13. | | DALLA RIZZA, M.; OBERTI, H.; MURCHIO, S.; DO CANTO, J.; ABREO, E.; ROSSI, C.; AYALA, W.; REYNO, R. Surjen nuevos caminos para aportar soluciones a problemas en el "pasto miel". Biotecnología. Revista INIA Uruguay, 2020, no.63, p.68-72. (Revista INIA; 63).Tipo: Artículos en Revistas Agropecuarias |
Biblioteca(s): INIA Treinta y Tres. |
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14. | | PRITSCH, C.; OBERTI, H.; VAIO, M.; BAZ, N.; MANGINO, M.; BERNÁ, L.; ROSSI, F.; RODRÍGUEZ DECUADRO, S.; QUEZADA, M.; GAIERO, P.; PESCE, M.; FILIPPI, C.; GARAYCOCHEA, S.; DINI, M.; GUTIÉRREZ GONZÁLEZ, J.; VARANI, A. Terra Incógnita: conociendo el genoma del guayabo del país. [Presentación oral]. Módulo 1. Recursos genéticos. Presentaciones Orales. In: Dini, M.; Speroni, G. (Eds.). Encuentro Nacional sobre Frutos Nativos, 11°. Universidad Tecnológica (UTEC), Durazno, Uruguay, 4 y 5 abril 2024, Libro de resúmenes. Canelones (UY): INIA, 2024. p.6. (Serie Actividades de Difusión; 804) Agradecimientos: A la Comisión Sectorial de Investigación Científica, Udelar por la financiación.Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Las Brujas. |
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Registros recuperados : 14 | |
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